exRNAdisease

Entry Detail

---



General Information

Database ID: exR0373635 RNA Name: ADAMTS19 RNA Type: mRNA Chromosome: chr5 Starnd: + Coordinate: Start Site(bp): 129460281 End Site(bp): 129738683 External Links: ENSG00000145808

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand RIT1 chr1 155897808 155911404 - NSFL1C chr20 1442162 1473842 - SCFD2 chr4 52872982 53366066 - RPL23A chr17 28719985 28724359 + TPT1 chr13 45333471 45341370 - GRK5 chr10 119207571 119459745 + GPR137C chr14 52552836 52637713 + SMPD2 chr6 109440724 109443919 + FAM124A chr13 51222334 51284241 + TSPAN6 chrX 100627108 100639991 - ZNF614 chr19 52012765 52030240 - EIF2D chr1 206571292 206612465 - GATA5 chr20 62463497 62475995 - CCZ1 chr7 5898725 5926550 + BZW1 chr2 200810594 200827338 + RPL3 chr22 39312882 39320389 - SYPL1 chr7 106090503 106112576 - BTAF1 chr10 91923770 92030325 + XPO6 chr16 28097979 28211920 - STX8 chr17 9250471 9576591 - HNRNPH3 chr10 68331174 68343191 + KHDRBS1 chr1 32013868 32060850 + RARB chr3 25174332 25597932 + FBXL19 chr16 30923055 30948783 + TPR chr1 186311652 186375693 - ATXN10 chr22 45671798 45845307 + SLC38A1 chr12 46183063 46270017 - NRAS chr1 114704469 114716771 - FLNA chrX 154348524 154374638 - DDOST chr1 20651767 20661544 - miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA