exRNAdisease

Entry Detail

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General Information

Database ID: exR0373668 RNA Name: ADCY7 RNA Type: mRNA Chromosome: chr16 Starnd: + Coordinate: Start Site(bp): 50246137 End Site(bp): 50318135 External Links: ENSG00000121281

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ACTG1 chr17 81509971 81523847 - ADCY4 chr14 24318349 24335093 - CNTROB chr17 7932101 7949920 + FTL chr19 48965309 48966879 + GLUD1 chr10 87050202 87094843 - GSTP1 chr11 67583742 67586656 + HSPE1 chr2 197500140 197503449 + MRPS6 chr21 34073224 34143034 + PNMA8A chr19 46466491 46471563 - RPL4 chr15 66498015 66524532 - RPL7A chr9 133348218 133351426 + SBNO2 chr19 1107637 1174268 - SLC5A3 chr21 34073578 34106260 + SRGN chr10 69088103 69104805 + SYNGR2 chr17 78168558 78173527 + TMEM189-UBE2V1 chr20 50081124 50153637 - TPT1 chr13 45333471 45341370 - TTC38 chr22 46267961 46294008 + UBE2V1 chr20 50081124 50115959 - ZFP36L1 chr14 68787660 68796253 - ZHX3 chr20 41178448 41317672 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AP000317.2 chr21 34073592 34360033 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA