exRNAdisease

Entry Detail

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General Information

Database ID: exR0374066 RNA Name: ANP32A RNA Type: mRNA Chromosome: chr15 Starnd: - Coordinate: Start Site(bp): 68778535 End Site(bp): 68820897 External Links: ENSG00000140350

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCG2 chr4 88090150 88231628 - ABHD14A-ACY1 chr3 51974706 51989183 + ABL1 chr9 130713016 130887675 + AC036214.3 chr8 79918860 80080775 - AC046185.1 chr17 63702845 63752097 - ACBD4 chr17 45132600 45144181 + ACTG1 chr17 81509971 81523847 - ACTG2 chr2 73892314 73919865 + ACY1 chr3 51983340 51989197 + AL138752.2 chr9 37588413 38068687 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016876.2 chr17 7581964 7584086 - AC024940.6 chr12 31280422 31280895 - AC109460.3 chr16 28974804 28990775 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA