exRNAdisease

Entry Detail

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General Information

Database ID: exR0374103 RNA Name: AP2B1 RNA Type: mRNA Chromosome: chr17 Starnd: + Coordinate: Start Site(bp): 35578046 End Site(bp): 35726413 External Links: ENSG00000006125

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCB7 chrX 75051048 75156732 - ABCG2 chr4 88090150 88231628 - ABHD2 chr15 89087459 89202355 + AC008982.1 chr19 38817471 38840178 - AC010132.3 chr7 42909273 42932174 - ACAT2 chr6 159762045 159779112 + ACTG1 chr17 81509971 81523847 - ADA chr20 44619522 44652233 - AIF1L chr9 131096476 131123152 + AL096711.2 chr6 127438406 127519001 - AL121758.1 chr20 646626 675800 - AL138752.2 chr9 37588413 38068687 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC245014.3 chr1 145281116 145281462 + AD000090.1 chr19 35557956 35581954 + AL021707.2 chr22 38667585 38681847 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA