exRNAdisease

Entry Detail

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General Information

Database ID: exR0374912 RNA Name: BTBD2 RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 1985438 End Site(bp): 2034881 External Links: ENSG00000133243

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABCD4 chr14 74285269 74303055 - ABCF2 chr7 151207837 151227166 - ABHD4 chr14 22598237 22613215 + AC009133.6 chr16 29812261 29820092 + AC022826.2 chr8 73688691 73878854 - AC092718.3 chr16 81053587 81096296 - AC092718.8 chr16 81022316 81096284 - AC118549.1 chr1 77562416 77683419 - AC137834.1 chr12 57249609 57296484 - ACLY chr17 41866917 41930542 - ADORA2A chr22 24417879 24442357 + AGRN chr1 1020120 1056118 + AJM1 chr9 136844415 136848801 + AL513165.2 chr9 37512547 37592469 - miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007952.4 chr17 19112000 19112636 - AC016876.2 chr17 7581964 7584086 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA