exRNAdisease

Entry Detail

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General Information

Database ID: exR0375214 RNA Name: C7orf50 RNA Type: mRNA Chromosome: chr7 Starnd: - Coordinate: Start Site(bp): 996986 End Site(bp): 1138260 External Links: ENSG00000146540

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC003006.1 chr19 57682045 57753575 + AC004832.3 chr22 30409255 30428990 + AC010422.3 chr19 12643831 12648397 - AC040162.1 chr16 67929614 67936017 - ACTB chr7 5527148 5563784 - ADAMTS1 chr21 26835755 26845409 - ADM2 chr22 50481543 50486440 + AKNA chr9 114334156 114394405 - AKR1A1 chr1 45550543 45570049 + AKT2 chr19 40230317 40285536 - AL162417.1 chr9 133098121 133163914 - AL928654.3 chr14 105487199 105492267 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC010442.1 chr5 466124 473098 - AL118506.1 chr20 63861212 63864293 - AL136090.1 chr20 19212852 19213477 - Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA