Entry Detail


General Information

Database ID:exR0375661
RNA Name:CCNY
RNA Type:mRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):35247025End Site(bp):35572669
External Links:ENSG00000108100



Disease Information

Disease Name:Low Birth Weight
Disease Category:Other Diseases
MeSH ID:D007230
Type:Age Groups/Infant
Alias:Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights



Expression Detail

GEO ID:GSE29807
Description:Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns
Experimental Design:Disease vs Control
Case Disease Type:Low Birth Weight
Case Disease SubType:NA
Case Sample:Low Birth Weight
Control Sample:Normal
Number of Case:8
Number of Control:4
Number of Samples:12





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.5
chr19
12664828
12669397
-
ADAM15
chr1
155050566
155062775
+
ADAR
chr1
154582057
154628013
-
ADD1
chr4
2843857
2930076
+
AHCY
chr20
34280268
34311802
-
AL157392.5
chr10
13610047
13655929
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3609
chr7
98881700
98881723
+
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE29807
Sample Source:Cord Blood
Source Fraction:Umblical Cord Blood
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:NA
RNA Extract protocol:The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions.
RNA library preparation protocol:Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA