exRNAdisease

Entry Detail

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General Information

Database ID: exR0389036 RNA Name: UBA2 RNA Type: mRNA Chromosome: chr19 Starnd: + Coordinate: Start Site(bp): 34428352 End Site(bp): 34471251 External Links: ENSG00000126261

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AATF chr17 36948954 37056871 + AC007192.1 chr19 18153158 18178117 + ACIN1 chr14 23058564 23095614 - ACOT7 chr1 6264269 6394391 - ACSF2 chr17 50426158 50474845 + ACTG1 chr17 81509971 81523847 - ADPGK chr15 72751369 72785846 - AICDA chr12 8602170 8612867 - AKAP8L chr19 15380050 15419141 - AL138752.2 chr9 37588413 38068687 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-296-3p chr20 58817626 58817647 - hsa-miR-1244 chr2 231713368 231713393 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC016876.2 chr17 7581964 7584086 - AC090204.1 chr8 32927913 33045445 + AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA