exRNAdisease

Entry Detail

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General Information

Database ID: exR0389049 RNA Name: UBAP2L RNA Type: mRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 154220179 End Site(bp): 154271510 External Links: ENSG00000143569

Disease Information

Disease Name: Low Birth Weight Disease Category: Other Diseases MeSH ID: D007230 Type: Age Groups/Infant Alias: Infant, Low Birth Weight//Low-Birth-Weight Infant//Infant, Low-Birth-Weight//Infants, Low-Birth-Weight//Low Birth Weight Infant//Low-Birth-Weight Infants//Low Birth Weight//Birth Weight, Low//Birth Weights, Low//Low Birth Weights

Expression Detail

GEO ID: GSE29807 Description: Gene expression study reveals compromised Pattern Recognition Receptors and Interferon Signaling in fullterm Low birth Weight newborns Experimental Design: Disease vs Control Case Disease Type: Low Birth Weight Case Disease SubType: NA Case Sample: Low Birth Weight Control Sample: Normal Number of Case: 8 Number of Control: 4 Number of Samples: 12

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004922.1 chr7 99325879 99394653 + AC007192.1 chr19 18153158 18178117 + AC010422.3 chr19 12643831 12648397 - AC011005.1 chr7 129126518 129130793 + AC091959.3 chr5 146203550 146339251 + ACAP3 chr1 1292390 1309609 - ACTG1 chr17 81509971 81523847 - ADCY6 chr12 48766194 48789037 - ADSL chr22 40346500 40390463 + AGBL5 chr2 27042364 27070622 + AGFG1 chr2 227472152 227561214 + AIP chr11 67483026 67491103 + AKR1A1 chr1 45550543 45570049 + AL022238.4 chr22 40346529 40410054 + AL136454.1 chr1 192716132 192716653 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006064.5 chr12 6510275 6510522 + AC023509.1 chr12 53441741 53467528 + AC055860.1 chr11 18000542 18022931 - AC087190.3 chr16 9104848 9113181 + AC135048.1 chr16 30948386 30956511 + AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: GSE29807 Sample Source: Cord Blood Source Fraction: Umblical Cord Blood Platform: GPL570 Method: Microarray Num of detected RNA Type: 1 Num of detected RNAs of this Type: 17063 Sample treatment protocol: NA RNA Extract protocol: The RNA was extracted using Tri-reagent (Sigma) as per manufacture's instructions. RNA library preparation protocol: Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA