Entry Detail


General Information

Database ID:exR0390484
RNA Name:ABCB7
RNA Type:mRNA
Chromosome:chrX
Starnd:-
Coordinate:
Start Site(bp):75051048End Site(bp):75156732
External Links:ENSG00000131269



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
YWHAZ
chr8
100916523
100953388
-
DDX5
chr17
64498254
64508199
-
MAPKAPK2
chr1
206684944
206734283
+
YWHAQ
chr2
9583967
9630997
-
MT-CO1
chrMT
5904
7445
+
CSNK2B
chr6
31665236
31670343
+
MAGED1
chrX
51803007
51902357
+
PBX2
chr6
32184733
32190202
-
CCNI
chr4
77047155
77075989
-
CFL1
chr11
65823022
65862026
-
TM7SF3
chr12
26971579
27014434
-
ADD1
chr4
2843857
2930076
+
AP002990.1
chr11
62559603
62591531
-
RARA
chr17
40309180
40357643
+
RPAIN
chr17
5419641
5432876
+
RPS12
chr6
132814569
132817564
+
IPO5
chr13
97953658
98024296
+
NOMO3
chr16
16232528
16294811
+
JMJD1C
chr10
63167221
63521850
-
MEN1
chr11
64803510
64811294
-
RAB11A
chr15
65726054
65891989
+
P4HB
chr17
81843161
81860624
-
EEF1G
chr11
62559596
62574086
-
TMSB4X
chrX
12975110
12977227
+
CAPN15
chr16
527712
554636
+
RABEP1
chr17
5282265
5386340
+
LPCAT1
chr5
1456480
1523962
-
INSIG1
chr7
155297776
155310235
+
ANP32B
chr9
97983341
98015943
+
TMED5
chr1
93149742
93180516
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
EBLN3P
chr9
37079645
37090928
+
LINC00205
chr21
45288050
45297806
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA