Entry Detail


General Information

Database ID:exR0390514
RNA Name:ABHD12
RNA Type:mRNA
Chromosome:chr20
Starnd:-
Coordinate:
Start Site(bp):25294742End Site(bp):25390835
External Links:ENSG00000100997



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
NAT8L
chr4
2059327
2069089
+
MAN2A1
chr5
109689366
109869625
+
CUTC
chr10
99702558
99756134
+
ERAL1
chr17
28855010
28861061
+
HMOX1
chr22
35380361
35394207
+
MSL2
chr3
136148917
136197241
-
ERBB2
chr17
39687914
39730426
+
RPL8
chr8
144789765
144792587
-
MX1
chr21
41420304
41459214
+
ACP6
chr1
147629652
147670524
-
SIRT6
chr19
4174109
4182566
-
LSM7
chr19
2321520
2328611
-
PDCD2L
chr19
34404399
34426168
+
TPX2
chr20
31739271
31801805
+
ZNF764
chr16
30553764
30558498
-
TSPAN3
chr15
77041404
77083984
-
CXADR
chr21
17513043
17593579
+
ARIH2
chr3
48918821
48986382
+
RBM27
chr5
146203605
146289223
+
GINS1
chr20
25407673
25452628
+
UBE2J1
chr6
89326625
89352722
-
RBM22
chr5
150690792
150701077
-
EEF2
chr19
3976056
3985463
-
MED16
chr19
867630
893218
-
CYB5R3
chr22
42617840
42649392
-
PHIP
chr6
78934419
79078254
-
RBFA
chr18
80034389
80050651
+
EIF2S2
chr20
34088309
34112243
-
FKBP10
chr17
41812680
41823213
+
EML4
chr2
42169353
42332548
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC012236.1
chr15
31221999
31230838
-
AD000090.1
chr19
35557956
35581954
+
AL135925.1
chr10
79825902
79827602
+
SNHG22
chr18
49814023
49851059
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA