Entry Detail


General Information

Database ID:exR0390531
RNA Name:ABHD8
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):17292131End Site(bp):17310236
External Links:ENSG00000127220



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ITM2C
chr2
230864639
230879248
+
TUBA3C
chr13
19173772
19181824
-
CAP1
chr1
40040233
40072649
+
HOXB5
chr17
48591257
48593961
-
RPLP2
chr11
809965
812880
+
ARHGEF7
chr13
111114559
111305737
+
NAP1L1
chr12
76036585
76084958
-
DUSP2
chr2
96143169
96145440
-
CHST11
chr12
104455295
104762014
+
IGFBP2
chr2
216632828
216664436
+
GALNS
chr16
88813734
88856970
-
RPS19
chr19
41860255
41872925
+
PTMS
chr12
6765516
6770952
+
EMC10
chr19
50476400
50490870
+
EIF4G2
chr11
10797050
10808940
-
DDX17
chr22
38483438
38507660
-
LRRC14
chr8
144517992
144525172
+
PTK7
chr6
43076307
43161719
+
FSTL1
chr3
120392293
120450993
-
DNASE2
chr19
12875209
12881466
-
ANXA11
chr10
80150889
80205572
-
UCHL1
chr4
41256413
41268455
+
S100A10
chr1
151982915
151993859
-
CITED4
chr1
40861054
40862363
-
DBN1
chr5
177456608
177474401
-
PKM
chr15
72199029
72231822
-
MDK
chr11
46380756
46383837
+
GALNT17
chr7
71132144
71713600
+
ZFP91
chr11
58579063
58621550
+
RPS28
chr19
8321158
8323340
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC069281.2
chr7
100572232
100578700
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA