Entry Detail


General Information

Database ID:exR0390555
RNA Name:ACAD9
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):128879596End Site(bp):128916067
External Links:ENSG00000177646



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATP5F1E
chr20
59025475
59032345
-
AC138811.2
chr16
18788063
18801519
-
GNA12
chr7
2728105
2844308
-
MAVS
chr20
3846799
3876123
+
TGS1
chr8
55773446
55826445
+
RPS4X
chrX
72255679
72277248
-
CABIN1
chr22
24011192
24178628
+
SLC30A9
chr4
41990502
42090461
+
SRSF7
chr2
38743599
38751494
-
RPS13
chr11
17074388
17077715
-
MIB2
chr1
1615415
1630610
+
EDARADD
chr1
236348257
236502915
+
ARFIP1
chr4
152779937
152918463
+
EI24
chr11
125569280
125584684
+
RPS25
chr11
119015712
119018691
-
GTF3C2
chr2
27325849
27357034
-
ATP6V1F
chr7
128862856
128865847
+
SLC36A1
chr5
151437046
151492379
+
RBMX
chrX
136848004
136880764
-
MT-ND2
chrMT
4470
5511
+
B2M
chr15
44711487
44718877
+
TOB1
chr17
50862223
50867978
-
ZNF551
chr19
57681969
57717301
+
PEBP1
chr12
118136124
118145584
+
ATP5MC2
chr12
53632726
53677408
-
EEF2
chr19
3976056
3985463
-
VIPAS39
chr14
77426675
77457952
-
SLC18A2
chr10
117241093
117279430
+
MID1IP1
chrX
38801432
38806537
+
SNRNP200
chr2
96274338
96321271
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA