Entry Detail


General Information

Database ID:exR0390559
RNA Name:ACADSB
RNA Type:mRNA
Chromosome:chr10
Starnd:+
Coordinate:
Start Site(bp):123008979End Site(bp):123058290
External Links:ENSG00000196177



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
B2M
chr15
44711487
44718877
+
B4GAT1
chr11
66345374
66347629
-
BUB3
chr10
123154402
123170467
+
C11orf58
chr11
16613132
16758340
+
CCND2
chr12
4273762
4305353
+
COX18
chr4
73052362
73069755
-
DDX24
chr14
94048287
94081212
-
DHCR24
chr1
54849627
54887195
-
EIF4E
chr4
98871684
98930637
-
HLA-B
chr6
31269491
31357188
-
MCFD2
chr2
46901870
46941855
-
MICB
chr6
31494881
31511124
+
NCOR1
chr17
16029157
16218185
-
NFATC3
chr16
68084751
68229259
+
NOP53
chr19
47745546
47757058
+
POGK
chr1
166839447
166856344
+
POLE3
chr9
113407235
113410675
-
RFFL
chr17
35005990
35089319
-
TPT1
chr13
45333471
45341370
-
VMP1
chr17
59707192
59842255
+
YWHAE
chr17
1344275
1400222
-
YWHAQ
chr2
9583967
9630997
-
ZNF100
chr19
21722771
21767579
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA