Entry Detail


General Information

Database ID:exR0412072
RNA Name:ALDH16A1
RNA Type:mRNA
Chromosome:chr19
Starnd:+
Coordinate:
Start Site(bp):49453225End Site(bp):49471050
External Links:ENSG00000161618



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MED22
chr9
133338312
133348131
-
SOX4
chr6
21593751
21598619
+
SLC52A2
chr8
144354135
144361272
+
LARGE2
chr11
45921621
45929096
+
EEF1A1
chr6
73515750
73523797
-
FASTK
chr7
151076593
151080866
-
FAT1
chr4
186587794
186726722
-
LGALS9
chr17
27629798
27649560
+
PPP1R10
chr6
30600413
30618612
-
GRB10
chr7
50590063
50793462
-
ATP6V1G2-DDX39B
chr6
31530219
31546608
-
SLC25A11
chr17
4937130
4940053
-
GSPT1
chr16
11868128
11916082
-
HOXB3
chr17
48548870
48604912
-
THOP1
chr19
2785503
2815807
+
CYB5B
chr16
69424619
69466264
+
ARFGAP1
chr20
63272785
63289790
+
CBX6
chr22
38861422
38872249
-
CTNNA1
chr5
138610967
138935034
+
B3GALT6
chr1
1232237
1235041
+
ADAMTS1
chr21
26835755
26845409
-
DHX36
chr3
154272546
154324487
-
ISG20L2
chr1
156721891
156728799
-
CDC34
chr19
531760
542092
+
ZNRF2
chr7
30284597
30367689
+
BCR
chr22
23179704
23318037
+
EEF2
chr19
3976056
3985463
-
RBM15
chr1
110338506
110346681
+
GPATCH2L
chr14
76151916
76254342
+
DDX39B
chr6
31530219
31542448
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020928.2
chr19
36773712
36775908
-
AC067852.1
chr17
42536510
42562062
+
AC132217.1
chr11
2129121
2129964
-
VPS9D1-AS1
chr16
89711856
89718165
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA