exRNAdisease

Entry Detail

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General Information

Database ID: exR0428628 RNA Name: ABHD17A RNA Type: mRNA Chromosome: chr19 Starnd: - Coordinate: Start Site(bp): 1876810 End Site(bp): 1885547 External Links: ENSG00000129968

Disease Information

Disease Name: Pediatric TB meningitis Disease Category: Infections MeSH ID: D014390 Type: Diseases Category/Infections Alias: Tuberculosis, Meningeal//Meningeal Tuberculoses//Meningeal Tuberculosis//Tuberculoses, Meningeal//TB Meningitis//TB Meningitides//Tubercular Meningitis//Meningitides, Tubercular//Meningitis, Tubercular//Tubercular Meningitides//Meningitis, Tuberculous//Meningitides, Tuberculous//Tuberculous Meningitides//Tuberculous Meningitis//Tuberculosis Meningitis//Meningitides, Tuberculosis//Meningitis, Tuberculosis//Tuberculosis Meningitides//Tuberculous Hypertrophic Pachymeningitis//Hypertrophic Pachymeningitides, Tuberculous//Hypertrophic Pachymeningitis, Tuberculous//Pachymeningitides, Tuberculous Hypertrophic//Pachymeningitis, Tuberculous Hypertrophic//Tuberculous Hypertrophic Pachymeningitides

Expression Detail

GEO ID: GSE122377 Description: Tuberculous Meningitis in Pediatric Patients [CSF] Experimental Design: Disease Sample Source Case Disease Type: Pediatric TB meningitis Case Disease SubType: NA Case Sample: Pediatric TB meningitis Control Sample: Lumbar Puncture Cerebrospinal Fluid Number of Case: 12 Number of Control: 12 Number of Samples: 24

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand SLC20A2 chr8 42416475 42541926 - PPP4R3A chr14 91457611 91510554 - AP001931.1 chr11 57741779 57804771 + EFNB2 chr13 106489745 106535662 - DNAJB1 chr19 14514769 14529770 - RPS15 chr19 1438358 1440494 + MSH5-SAPCD1 chr6 31740020 31764851 + TUBB2A chr6 3153666 3157544 - NBEAL2 chr3 46979666 47009704 + PRPF6 chr20 63981132 64033100 + PIP5K1C chr19 3630183 3700479 - CEBPG chr19 33373685 33382686 + NAA16 chr13 41311267 41377030 + SUPT5H chr19 39436156 39476670 + MT-CO2 chrMT 7586 8269 + LUC7L2 chr7 139340359 139423457 + AC091167.2 chr15 90249556 90272208 + ELMO2 chr20 46366050 46432985 - HNRNPH1 chr5 179614178 179634784 - ACOT7 chr1 6264269 6394391 - SETD5 chr3 9397615 9479240 + ABHD17C chr15 80679684 80755621 + GPX4 chr19 1103926 1106791 + EIF5 chr14 103333544 103345025 + NUB1 chr7 151341699 151378449 + FGFR1 chr8 38400215 38468834 - NF2 chr22 29603556 29698598 + RBCK1 chr20 407498 430966 + UPF1 chr19 18831938 18868236 + SLC25A3 chr12 98593591 98606379 + miRNA targets: NA circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 31434901 Title: Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity Author: Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ Journal: Nat Commun. 2019 Aug 21;10(1):3767. Description: Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.