Entry Detail


General Information

Database ID:exR0444804
RNA Name:ACOX3
RNA Type:mRNA
Chromosome:chr4
Starnd:-
Coordinate:
Start Site(bp):8366282End Site(bp):8440723
External Links:ENSG00000087008



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AFAP1
chr4
7758714
7939926
-
COX4I1
chr16
85798633
85807068
+
COX7C
chr5
86617928
86620962
+
DOCK10
chr2
224765090
225042445
-
HADH
chr4
107989714
108035175
+
HSPA9
chr5
138553756
138575416
-
IFI6
chr1
27666064
27672198
-
INTS10
chr8
19817391
19852083
+
LRRC1
chr6
53794497
53924125
+
MUTYH
chr1
45329163
45340893
-
PABPC1
chr8
100685816
100722809
-
PCBP1
chr2
70087477
70089203
+
RACK1
chr5
181236897
181248096
-
SERGEF
chr11
17788048
18013047
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC055860.1
chr11
18000542
18022931
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.