Entry Detail


General Information

Database ID:exR0444884
RNA Name:ADAMTS12
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):33523535End Site(bp):33892019
External Links:ENSG00000151388



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
B2M
chr15
44711487
44718877
+
CLN6
chr15
68206992
68257211
-
DDIT4
chr10
72273924
72276036
+
HLA-B
chr6
31269491
31357188
-
KRT7
chr12
52232520
52252186
+
NEK9
chr14
75079353
75127344
-
NMRK1
chr9
75060573
75088217
-
PADI2
chr1
17066761
17119451
-
RPS9
chr19
54200809
54249003
+
SMAD5
chr5
136132845
136188747
+
ZNF385C
chr17
42025576
42098479
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.