Entry Detail


General Information

Database ID:exR0444913
RNA Name:ADCK5
RNA Type:mRNA
Chromosome:chr8
Starnd:+
Coordinate:
Start Site(bp):144373101End Site(bp):144393242
External Links:ENSG00000173137



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CCNL2
chr1
1385711
1399335
-
ELP6
chr3
47495640
47513712
-
EXOC1
chr4
55853648
55905086
+
FKBP8
chr19
18531751
18544077
-
GLDC
chr9
6532464
6645783
-
HMGB3
chrX
150980509
150990771
+
MACF1
chr1
39081316
39487177
+
NECTIN1
chr11
119623408
119729200
-
SREK1IP1
chr5
64718148
64768691
-
TUBA4A
chr2
219249710
219278170
-
WDR82
chr3
52254434
52288020
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.