Entry Detail


General Information

Database ID:exR0445071
RNA Name:AJM1
RNA Type:mRNA
Chromosome:chr9
Starnd:+
Coordinate:
Start Site(bp):136844415End Site(bp):136848801
External Links:ENSG00000232434



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACAP3
chr1
1292390
1309609
-
AIMP2
chr7
6009255
6023834
+
BTBD2
chr19
1985438
2034881
-
EPN1
chr19
55675226
55709858
+
LRFN4
chr11
66856647
66860475
+
MAP2K1
chr15
66386817
66492312
+
PABPC4
chr1
39560816
39576790
-
PCBP1
chr2
70087477
70089203
+
PFN1
chr17
4945652
4949061
-
PHPT1
chr9
136848724
136851027
+
TNRC18
chr7
5306790
5425414
-
TPD52L2
chr20
63865228
63891545
+
UBN2
chr7
139230356
139308236
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
BTG3-AS1
chr21
17611744
17633199
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.