Entry Detail


General Information

Database ID:exR0445142
RNA Name:ALDH1A2
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):57953424End Site(bp):58497866
External Links:ENSG00000128918



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CC2D1A
chr19
13906201
13930879
+
DDR1
chr6
30876421
30900156
+
LTBP4
chr19
40592883
40629818
+
MT-CO2
chrMT
7586
8269
+
MT-CYB
chrMT
14747
15887
+
NFATC2IP
chr16
28950807
28967097
+
PLCG2
chr16
81739097
81962685
+
RIPOR1
chr16
67518418
67546788
+
SENP3
chr17
7561919
7571969
+
SRCAP
chr16
30698209
30741409
+
TSC22D4
chr7
100463359
100479232
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.