Entry Detail


General Information

Database ID:exR0510766
RNA Name:ABCB9
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):122920951End Site(bp):122981649
External Links:ENSG00000150967



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CS
chr12
56271699
56300391
-
EIF3C
chr16
28688558
28735730
+
EPB41L4B
chr9
109171975
109320964
-
ERF
chr19
42247569
42255128
-
FAU
chr11
65120630
65122177
-
FOXRED2
chr22
36487190
36507101
-
LARP1
chr5
154712843
154817605
+
LCOR
chr10
96832282
96995959
+
LMO2
chr11
33858576
33892076
-
PAQR4
chr16
2969270
2973484
+
PVR
chr19
44643798
44666162
+
SNRPD3
chr22
24555958
24582052
+
TCF25
chr16
89873570
89913627
+
TMEM259
chr19
1009648
1021179
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC245014.3
chr1
145281116
145281462
+
AC079949.1
chr12
127142029
127146532
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.