Entry Detail


General Information

Database ID:exR0510835
RNA Name:ACBD3
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):226144679End Site(bp):226186741
External Links:ENSG00000182827



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MTRNR2L12
chr3
96617188
96618236
-
SLC16A2
chrX
74421493
74533917
+
RPS24
chr10
78033760
78056813
+
NUSAP1
chr15
41320794
41381050
+
LRWD1
chr7
102464956
102473168
+
S1PR4
chr19
3172346
3180332
+
RSU1
chr10
16590611
16817463
-
RPL15
chr3
23916545
23924374
+
FOCAD
chr9
20658309
20995955
+
GPR176
chr15
39799008
39920266
-
RAPGEF1
chr9
131576770
131740074
-
UTP18
chr17
51260546
51297936
+
LIMCH1
chr4
41359607
41700044
+
ZNF224
chr19
44094339
44109886
+
TTC39C
chr18
23992773
24135610
+
IGFBP5
chr2
216672105
216695549
-
YTHDF1
chr20
63195429
63216139
-
RGS10
chr10
119499817
119542719
-
CFL1
chr11
65823022
65862026
-
TPT1
chr13
45333471
45341370
-
RASGRP2
chr11
64726911
64745456
-
ACLY
chr17
41866917
41930542
-
UQCRQ
chr5
132866630
132868847
+
ID4
chr6
19837370
19842197
+
CSNK1E
chr22
38290691
38318084
-
PUM1
chr1
30931506
31065991
-
ZBTB33
chrX
120250752
120258398
+
TSN
chr2
121737103
121767853
+
HK1
chr10
69269984
69401884
+
DNPEP
chr2
219373527
219400022
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009404.1
chr2
117833937
117841658
+
AC023908.2
chr15
39770559
39801333
-
AL022311.1
chr22
37876148
37895563
+
AL513314.2
chr1
222477252
222504622
-
MIR663AHG
chr20
26167817
26251546
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.