Entry Detail


General Information

Database ID:exR0511083
RNA Name:AICDA
RNA Type:mRNA
Chromosome:chr12
Starnd:-
Coordinate:
Start Site(bp):8602170End Site(bp):8612867
External Links:ENSG00000111732



Disease Information

Disease Name:Lactation
Disease Category:Other Diseases
MeSH ID:D007774
Type:Phenomena and Processes Category/Reproductive and Urinary Physiological Phenomena
Alias:Milk Secretion//Milk Secretions//Lactation, Prolonged//Lactations, Prolonged//Prolonged Lactation//Prolonged Lactations



Expression Detail

GEO ID:GSE36936
Description:Gene Expression in the Human Mammary Epithelium during Initiation of Lactation.
Experimental Design:Time Series
Case Disease Type:Lactation
Case Disease SubType:NA
Case Sample:12h post delivery
Control Sample:6h post delivery
Number of Case:7
Number of Control:7
Number of Samples:14





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ERCC5
chr13
102807146
102876001
+
UBE2Z
chr17
48908407
48929056
+
TAPBP
chr6
33299694
33314387
-
ALDH9A1
chr1
165662216
165698863
-
ITM2C
chr2
230864639
230879248
+
ACTR1B
chr2
97655939
97664044
-
LGMN
chr14
92703807
92748679
-
ABL1
chr9
130713016
130887675
+
AC027644.4
chr7
66628958
66811189
+
RPL30
chr8
98024851
98046469
-
ATP5MG
chr11
118401606
118431496
+
POMT2
chr14
77274956
77320884
-
RPS16
chr19
39433137
39435949
-
SMUG1
chr12
54121277
54189008
-
UBA2
chr19
34428352
34471251
+
DCAF1
chr3
51395867
51500002
-
MT-ND4
chrMT
10760
12137
+
NADSYN1
chr11
71453109
71524107
+
AP001781.2
chr11
111786286
111879425
-
GAPDH
chr12
6534512
6538374
+
NACA2
chr17
61590421
61591219
-
TOP2A
chr17
40388525
40417896
-
GAS2L3
chr12
100573683
100628288
+
POLG2
chr17
64477785
64497054
-
ATP5F1C
chr10
7788147
7807815
+
RPL8
chr8
144789765
144792587
-
MTRNR2L8
chr11
10507894
10509186
-
OVOL1
chr11
65787063
65797214
+
RABGEF1
chr7
66682164
66811464
+
SLC25A3
chr12
98593591
98606379
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC02154
chrX
13266048
13303452
-
MIR155HG
chr21
25561909
25575168
+
TSPOAP1-AS1
chr17
58324472
58415766
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:22649065
Title:Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans
Author:Mohammad MA, Hadsell DL, Haymond MW.
Journal:Am J Physiol Endocrinol Metab. 2012 Aug 1;303(3):E365-76.
Description:We have utilized our established model of the RNA isolated from breast milk fat globule from seven healthy, exclusively breastfeeding women from 6 h to 42 days following delivery to determine the temporal coordination of changes in gene expression in the carbohydrate metabolic processes emphasizing the lactose synthesis pathway in human mammary epithelial cell.