exRNAdisease

Entry Detail

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General Information

Database ID: exR0807868 RNA Name: hsa-miR-4492 RNA Type: miRNA Chromosome: chr11 Starnd: + Coordinate: Start Site(bp): 118910765 End Site(bp): 118910781 External Links: hsa-miR-4492

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE71008 Description: Plasma extracellular RNA profiles in healthy and cancer patients Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 100 Number of Control: 50 Number of Samples: 150

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AGFG1 chr2 227472152 227561214 + NRARP chr9 137299631 137302271 - RHOA chr3 49359145 49412998 - AATF chr17 36948954 37056871 + ANOS1 chrX 8528874 8732137 - DDRGK1 chr20 3190350 3204685 - FBXL3 chr13 76992598 77027195 - LEPR chr1 65420652 65641559 + MDP1 chr14 24213943 24216070 - MELTF chr3 196988621 197029817 - NCKAP5L chr12 49791146 49828750 - PKN3 chr9 128702503 128720916 + RNF149 chr2 101271219 101308701 - SH3BP2 chr4 2793071 2841098 + SNAPC2 chr19 7920338 7923250 + SOCS2 chr12 93569814 93583487 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AL096870.2 chr14 24209646 24215987 - Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26786760 Title: Plasma extracellular RNA profiles in healthy and cancer patients Author: Yuan T, Huang X, Woodcock M, Du M, Dittmar R, Wang Y, Tsai S, Kohli M, Boardman L, Patel T, Wang L Journal: Sci Rep. 2016 Jan 20;6:19413. Description: we performed RNA sequencing analysis on plasma extracellular vesicles derived from 50 healthy individuals and 142 cancer patients.